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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923159.1_cds_XP_016471852.1_64143
CDS Infomation

[gene=LOC107793917] [db_xref=GeneID:107793917] [protein=probable beta-1,4-xylosyltransferase IRX10L] [protein_id=XP_016471852.1] [location=complement(join(27941..28454,28821..29062,29268..29656,31512..31617))] [gbkey=CDS]
Sequence

ATGAGGAATTGGACTTGGGGTTTTGTTGGTCTTCTTTATCTTGCTCTCTTGTTGAAGATT
GAAGCCTTGAAATTTCATAGGACTGAACAAACTGAGAGAATATCAGGAAGTGCTGGTGAT
GTCTTGGAAGATGATCCTGTTGGGAGATTAAAAGTTTTTGTTTATGAGCTTCCCAGCAAA
TACAACAAGAAAATTCTGCAGAAAGACCAACGATGCCTCAACCACATGTTTGCTGCTGAA
ATCTATATGCATCGTTTCCTATTATCTAGCGCTGTCCGTACCTTTAATCCTGAGGAAGCA
GATTGGTTCTATACCCCTGTTTACACCACTTGTGACCTGACACCGAATGGCCTTCCCTTA
CCGTTTAAGTCACCACGTATGATGAGGAGTGCAATACAACTTATTGCTTCTAATTGGCCG
TACTGGAATAGGACAGAGGGAGCTGATCATTTCTTCATCACACCCCATGATTTTGGTGCT
TGTTTTCACTATCAAGAAGAAAAAGCTATTGAGAGGGGAATTCTTCCATTGCTCCAACGT
GCTACCCTGGTTCAAACTTTTGGACAACGAAATCATGTTTGTTTGAAAGATGGCTCAATT
ACAATTCCTCCATATGCTCCCCCACAAAAAATGCAATCCCACTTGATCCCTCCAGATACT
CCCCGATCTATCTTTGTTTATTTCCGAGGCTTGTTTTATGACGTCGGAAATGACCCAGAA
GGTGGTTACTATGCGAGAGGCGCCCGAGCAGCGGTGTGGGAGAACTTTAAAGACAATCCT
CTCTTTGATATTTCTACGGAGCATCCAACTACTTACTATGAAGATATGCAGCGAGCTATC
TTTTGCTTGTGTCCACTGGGGTGGGCACCATGGAGTCCAAGATTGGTTGAAGCAGTTATA
TTTGGCTGCATCCCTGTTATTATAGCAGATGACATTGTCTTGCCATTTGCTGATGCAATC
CCCTGGGAAGATATTGGCGTGTTTGTAGCAGAGAAAGATGTGCCAACTTTGGACACCATT
CTCACTTCTATTCCACCGGAAGAAATATTGAGGAAGCAGAGATTGCTTGCCAATCCTTCA
ATGAAGCAGGCAATGTTATTTCCACAACCTGCTCAATCAGGTGATGCTTTTCATCAGATT
TTGAATGGACTTGCACGTAAACTGCCTCACGACAAGAGCACTTACTTGAAGCCTGGAGAG
AAGTTCTTAAACTGGACTGCTGGTCCAGTTGGCGACCTAAAACCTTGGTAG

Peptide Sequence

PEP ID

XP_016471852.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tabacum]
Sequence

MRNWTWGFVGLLYLALLLKIEALKFHRTEQTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDQRCLNHMFAAEIYMHRFLLSSAVRTFNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLIASNWPYWNRTEGADHFFITPHDFGACFHYQEEKAIERGILPLLQR
ATLVQTFGQRNHVCLKDGSITIPPYAPPQKMQSHLIPPDTPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEDIGVFVAEKDVPTLDTILTSIPPEEILRKQRLLANPS
MKQAMLFPQPAQSGDAFHQILNGLARKLPHDKSTYLKPGEKFLNWTAGPVGDLKPW

Transcript Sequence

Gene sequence data has not been registered.